Package org.example.chapter2_search_problems

Class Gene

java.lang.Object

org.example.chapter2_search_problems.Gene

public class Gene
extends Object

DNA Search.

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	Gene.Codon	Codon from 3 nucleotide.
static enum	Gene.Nucleotide	Nucleotide enum.

Constructor Summary

Constructors

Constructor	Description
Gene(String geneStr)	Convert gene String into a Gene.

Method Summary

Modifier and Type	Method	Description
boolean	binaryContains(Gene.Codon key)	Find a specific codon in a codon sequence via binary search after sorting.
boolean	linearContains(Gene.Codon key)	Find a specific codon in a codon sequence via linear search.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

Gene

public Gene(String geneStr)

Convert gene String into a Gene.

Parameters:

geneStr - gene String

Method Details

linearContains

public boolean linearContains(Gene.Codon key)

Find a specific codon in a codon sequence via linear search.

Parameters:

key - search codon

Returns:

if find -> true, else -> false

binaryContains

public boolean binaryContains(Gene.Codon key)

Find a specific codon in a codon sequence via binary search after sorting.

Parameters:

key - search codon

Returns:

if find -> true, else -> false